Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919229.1_cds_XP_016468467.1_61101
CDS Infomation

[gene=LOC107791003] [db_xref=GeneID:107791003] [protein=cytokinin dehydrogenase 5-like] [protein_id=XP_016468467.1] [location=join(6956..7535,8142..8269,8877..9152,10286..10548,12590..12926)] [gbkey=CDS]
Sequence

ATGGCTACTAAACTTTTGTTGACACTTGCTATATGTCGGCTTATTGTAACCGTTGGGTTT
ACGTTTGACCCGACCGAGCTTTTACGGCTCGGGCTCAACGGAAACCTCAGCGTAGCGGCA
GCCGATTTAGAAACCGCCTCCGTGGACTTCGGCCGGTTGCATAGAGCCGAGCCGATGGCG
GTTCTTCACCCAGCTACAGCCGAGGACGTAGCGCGGCTTGTGAAAGCGGCGTATGACTCG
GCTCGTGGCTTCACCGTGTCGGCTAGAGGACACGGACATTCTATAAATGGTCAGGCTATG
ACAACAAAAGGAGTTGTGATTCAAATGAGCGGCGGCTCTAACTCTAAGCAGAAGTTATTG
ACCGAGGTTTCGGAGAAATTCATGTATGCTGATGTGTGGGGTGGAGAGTTATGGATAGAT
GTGTTGACGTCCACCTTAGAGTATGGACTTGCACCAAAATCATGGACTGATTACTTGTAC
TTATCTGTGGGTGGTACTCTCTCCAATGCTGGTATTAGTGGACAAGCTTTCAATCATGGC
CCTCAAATTAACAATGTTCATGAGCTTGATGTTGTTACAGGTAAGGGTGAGCTATTAACA
TGTTCAGAAAAAGAAAACTCCGAGCTGTTTCATGCTGCTCTTGGTGGATTAGGACAATTT
GGGATCATAACAAGGGCAAGAATTGCACTTGAACAAGCTCCCCAAAGGGTGAGGTGGATC
CGAGTTTTATATTCGAATTTTTCAACATTTACCGAAGACCAAGAATATCTAATATCTCTA
CAGGCAAAACCAGCTTCCCAAAAATTTGACTATGTTGAAGGATTTGTTATAGTTGATGAA
GGCCTCATTAACAACTGGAGATCTTCTTTCTTCTCCCCAAGTAACCCTGTGAAGATTTCT
TCTCTTAAGGCTGACGGAGGAGTTTTATATTGCTTAGAAATCACCAAAAATTATCACCTT
TCAAATGCTGATATCGTTGATCAGGAGATAGAGACTTTGTTAAAAAAGCTAAAATATATA
CCAGCATCAGTTTTCACAACAGACCTTCCTTACGTGGATTTCTTGGACCGGGTTCACAAG
GCAGAGTTGAAACTCCGGTCTAAAGGGTTGTGGGAAGTGCCACACCCATGGCTAAACCTA
TTTGTTCCAAAATCAAGAATTGTGGACTTCGATAAAGGAGTTTTTAAGGGCATTTTGGGG
AATAAGACCAGTGGTCCCATACTCATCTACCCCATGAACAAGAACAAGTGGGACGAGAGG
AGTTCAGTAGTGACACCAGAGGAGGAGGTTTTTTACTTAGTGGGATTTCTGAGGTCGGCA
TTGACAAACAGTGACGAGACACAGACATTAGAGTACCTCAGCAATCAAAACTACGAAATA
TTGAAGTTTTGTGAAGATGCAAATATCAAAATCAAACAATACCTGCCTCATTACACAACA
CAAAGAGAATGGAGGGACCATTTTGGAGATAAGTATTGGACCAGATTTCAGCAAAGGAAA
TTAGAGTTTGACCCAAGACATATTTTAGCTACCGGCCAACGTATTTTCATGCCTTCTTTT
AATCCTAATACTGCCTCTTGGTGA

Peptide Sequence

PEP ID

XP_016468467.1
PEP Infomation

PREDICTED: cytokinin dehydrogenase 5-like [Nicotiana tabacum]
Sequence

MATKLLLTLAICRLIVTVGFTFDPTELLRLGLNGNLSVAAADLETASVDFGRLHRAEPMA
VLHPATAEDVARLVKAAYDSARGFTVSARGHGHSINGQAMTTKGVVIQMSGGSNSKQKLL
TEVSEKFMYADVWGGELWIDVLTSTLEYGLAPKSWTDYLYLSVGGTLSNAGISGQAFNHG
PQINNVHELDVVTGKGELLTCSEKENSELFHAALGGLGQFGIITRARIALEQAPQRVRWI
RVLYSNFSTFTEDQEYLISLQAKPASQKFDYVEGFVIVDEGLINNWRSSFFSPSNPVKIS
SLKADGGVLYCLEITKNYHLSNADIVDQEIETLLKKLKYIPASVFTTDLPYVDFLDRVHK
AELKLRSKGLWEVPHPWLNLFVPKSRIVDFDKGVFKGILGNKTSGPILIYPMNKNKWDER
SSVVTPEEEVFYLVGFLRSALTNSDETQTLEYLSNQNYEILKFCEDANIKIKQYLPHYTT
QREWRDHFGDKYWTRFQQRKLEFDPRHILATGQRIFMPSFNPNTASW

Transcript Sequence

Gene sequence data has not been registered.